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7QCH

Structure of SARS-CoV-2 Papain-like Protease bound to N-(3,5-dimethoxy-4-hydroxybenzyliden)thiosemicarbazone

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, DESY BEAMLINE P11
Synchrotron sitePETRA III, DESY
BeamlineP11
Temperature [K]100
Detector technologyPIXEL
Collection date2020-12-20
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.0332
Spacegroup nameP 32 2 1
Unit cell lengths83.650, 83.650, 134.166
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution49.220 - 1.880
R-factor0.2097
Rwork0.208
R-free0.23540
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7nfv
RMSD bond length0.010
RMSD bond angle1.091
Data reduction softwareDIALS
Data scaling softwareDIALS
Phasing softwarePHASER
Refinement softwarePHENIX (1.18-3855_9999)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.2201.947
High resolution limit [Å]1.8801.880
Number of reflections448324403
<I/σ(I)>12.94
Completeness [%]99.8
Redundancy10.6
CC(1/2)0.9990.698
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2770.1 M Tris-HCl pH 8.0, 10% glycerol, 0.8 M sodium dihydrogenphosphate, 1.2 M potassium hydrogenphosphate

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