7Q9W
Crystal structure of the C-terminal catalytic domain of Plasmodium falciparum CTP:phosphocholine cytidylyltransferase with 4-(aminomethyl)pyridin-2-amine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-1 |
Synchrotron site | ESRF |
Beamline | MASSIF-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-03-12 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.96546 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 50.593, 68.715, 117.119 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 59.270 - 1.800 |
R-factor | 0.1768 |
Rwork | 0.175 |
R-free | 0.20840 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4zct |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (v1.19) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 59.270 | 59.267 | 1.867 |
High resolution limit [Å] | 1.803 | 4.768 | 1.803 |
Rmerge | 0.043 | 0.024 | 1.116 |
Rmeas | 0.048 | 0.027 | 1.247 |
Rpim | 0.021 | 0.012 | 0.547 |
Total number of observations | 110445 | 5404 | 3713 |
Number of reflections | 19136 | 1128 | 1881 |
<I/σ(I)> | 17 | 49 | 1.3 |
Completeness [%] | 92.7 | 98.6 | 46.4 |
Redundancy | 2 | 4.8 | 2 |
CC(1/2) | 0.999 | 0.999 | 0.511 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 291.15 | PEG 4000 19%, TRIS pH8 0.1M Guanidine HCl 6-7-8-9-10% Glycerol 5-6-7% |