Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7Q5F

Crystal structure of F2F-2020216-01X bound to the main protease (3CLpro/Mpro) of SARS-CoV-2.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsELETTRA BEAMLINE 11.2C
Synchrotron siteELETTRA
Beamline11.2C
Temperature [K]100
Detector technologyPIXEL
Collection date2021-07-21
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.000
Spacegroup nameP 21 21 21
Unit cell lengths67.866, 100.441, 103.631
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.430 - 1.720
R-factor0.1736
Rwork0.172
R-free0.19580
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7bb2
RMSD bond length0.013
RMSD bond angle1.267
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]103.6301.750
High resolution limit [Å]1.7201.720
Rmerge0.104
Number of reflections759373969
<I/σ(I)>14
Completeness [%]100.0
Redundancy9.5
CC(1/2)0.9990.613
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.09M Sodium nitrate 0.09 Sodium phosphate dibasic 0.09M Ammonium sulfate, 0.1M Hepes/MOPS pH 7.5, 20% v/v PEG 500 MME 10 % w/v PEG 20000

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon