7Q1L
Glycosilated Human Serum Apo-tranferrin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL14-1 |
Synchrotron site | SSRL |
Beamline | BL14-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-04-27 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.127 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 87.631, 102.148, 199.969 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.350 - 3.000 |
R-factor | 0.221 |
Rwork | 0.220 |
R-free | 0.24940 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2hav |
RMSD bond length | 0.005 |
RMSD bond angle | 0.853 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | MOLREP |
Refinement software | PHENIX (1.19-4092) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 37.350 | 37.350 | 3.130 |
High resolution limit [Å] | 3.000 | 10.390 | 3.000 |
Rmerge | 0.096 | 0.040 | 1.606 |
Rmeas | 0.104 | 0.043 | 1.718 |
Rpim | 0.038 | 0.016 | 0.606 |
Total number of observations | 267933 | 6467 | 35356 |
Number of reflections | 36713 | 979 | 4437 |
<I/σ(I)> | 9.9 | 31.2 | 1.3 |
Completeness [%] | 99.9 | 98 | 100 |
Redundancy | 7.3 | 6.6 | 8 |
CC(1/2) | 0.999 | 0.999 | 0.590 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 291.5 | 0.2 M Ammonium Citrate pH 7.0, 20% PEG 3350 |