7Q07
Ketol-acid reductoisomerase from Methanothermococcus thermolithotrophicus in the open state with NADP and tartrate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-06-24 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97916 |
Spacegroup name | I 2 3 |
Unit cell lengths | 130.827, 130.827, 130.827 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.370 - 2.200 |
R-factor | 0.19 |
Rwork | 0.186 |
R-free | 0.21230 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7q03 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.250 | 2.320 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.163 | 0.528 |
Rmeas | 0.168 | 0.554 |
Rpim | 0.039 | 0.166 |
Number of reflections | 19073 | 2766 |
<I/σ(I)> | 23.7 | 4.4 |
Completeness [%] | 100.0 | 100 |
Redundancy | 18.2 | 10.9 |
CC(1/2) | 0.998 | 0.385 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291.15 | KARI was crystallized at 13.5 mg/ml in the following buffer 25 mM Tris/HCl pH 7.6, 2 mM dithiothreitol, 10% glycerol. The reservoir was filled with 90 ul crystallization solution (33 % (w/v) PEG 5000 MME, 100 mM MES/NaOH pH 6.5 and 200 mM ammonium sulphate). Drops of 0.7 ul protein with 0.7 ul of crystallisation solution were applied on the shelf. Crystals were firstly soaked in the crystallisation solution supplemented with 20 mM NADP, 50 mM L-Tartrate and 50 mM MgCl2 for 3 minutes, and then soaked in the crystallisation solution supplemented with 30 % v/v glycerol before freezing. |