Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7PV8

InlB392_T332E: T332E variant of Listeria monocytogenes InlB (internalin B) residues 36-392

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.2
Synchrotron siteBESSY
Beamline14.2
Temperature [K]100
Detector technologyPIXEL
Collection date2018-01-18
DetectorDECTRIS PILATUS3 S 2M
Wavelength(s)0.9184
Spacegroup nameP 21 21 21
Unit cell lengths44.580, 54.590, 226.720
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution16.150 - 2.050
R-factor0.1885
Rwork0.186
R-free0.22870
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1h6t 2y5p
RMSD bond length0.008
RMSD bond angle0.829
Data reduction softwareXDS (VERSION Jun 1, 2017 BUILT=20170923)
Data scaling softwareXSCALE (VERSION Jun 1, 2017 BUILT=20170923)
Phasing softwarePHASER (2.8.2)
Refinement softwarePHENIX (1.19.1_4122)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.100
High resolution limit [Å]2.0502.050
Rmeas0.1221.956
Number of reflections358612598
<I/σ(I)>16.561.74
Completeness [%]99.9100
Redundancy13.513.8
CC(1/2)0.9990.792
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5277Reservoir solution (Morpheus screen (Molecular Dimensions) condition G2): 0.1 M (imidazole / MES), pH 6.5; 20 % v/v ethylene glycol; 10 % w/v PEG 8,000; 0.02 M sodium formate; 0.02 M ammonium acetate; 0.02 M sodium citrate tribasic dehydrate; 0.02 M sodium potassium tartrate tetrahydrate; 0.02 M sodium oxamate; Protein solution: 10 mg/ml in 10 mM Tris, pH 8.0, 20 mM NaCl; Drop size: 100 nl + 100 nl (protein + reservoir)

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon