7PUL
Crystal structure of Endoglycosidase E GH20 domain from Enterococcus faecalis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-02-08 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9686 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 39.298, 57.046, 69.525 |
Unit cell angles | 90.00, 92.97, 90.00 |
Refinement procedure
Resolution | 44.077 - 1.400 |
R-factor | 0.1591 |
Rwork | 0.158 |
R-free | 0.18290 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3rpm |
RMSD bond length | 0.041 |
RMSD bond angle | 0.945 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.080 | 1.450 |
High resolution limit [Å] | 1.400 | 1.400 |
Rmerge | 0.077 | 0.244 |
Rmeas | 0.093 | 0.295 |
Number of reflections | 60346 | 6021 |
<I/σ(I)> | 11.92 | 2.12 |
Completeness [%] | 99.7 | 99.52 |
Redundancy | 3.2 | 3 |
CC(1/2) | 0.991 | 0.894 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 100 mM bicine/Trizma base pH 8.5, 30 mM magnesium chloride hexahydrate, 30 mM calcium chloride dihydrate, 12.5% w/v PEG 1000, 12.5% PEG w/v 3350, 12.5% v/v MPD |