7PO9
Crystal structure of ZAD-domain of M1BP protein from D.melanogaster
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-07-19 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.900 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 27.853, 48.827, 141.586 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 70.790 - 1.900 |
R-factor | 0.2434 |
Rwork | 0.241 |
R-free | 0.28630 |
Structure solution method | SAD |
RMSD bond length | 0.013 |
RMSD bond angle | 2.095 |
Data reduction software | HKL-2000 |
Data scaling software | Aimless (0.7.7) |
Phasing software | SHELXDE |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 141.590 | 141.590 | 1.730 |
High resolution limit [Å] | 1.700 | 9.000 | 1.700 |
Rmerge | 0.059 | 0.032 | 2.275 |
Rmeas | 0.061 | 0.034 | 2.470 |
Rpim | 0.018 | 0.011 | 0.929 |
Total number of observations | 250275 | 1957 | 6248 |
Number of reflections | 21730 | 204 | 919 |
<I/σ(I)> | 13.6 | 114.6 | 0.2 |
Completeness [%] | 97.9 | 99.4 | 80.6 |
Redundancy | 11.5 | 9.6 | 6.8 |
CC(1/2) | 0.999 | 0.999 | 0.677 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 277 | 0.2M Calcium Acetate, 0.1MES pH 6.0, 20% PEG8000 |