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7PKX

Crystal structure of a DyP-type peroxidase from Bacillus subtilis in P3121 space group

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALBA BEAMLINE XALOC
Synchrotron siteALBA
BeamlineXALOC
Temperature [K]100
Detector technologyPIXEL
Collection date2019-11-20
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97926
Spacegroup nameP 31 2 1
Unit cell lengths95.271, 95.271, 181.244
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution75.092 - 2.491
R-factor0.1931
Rwork0.193
R-free0.19310
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4grc
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwareMoRDa
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]75.0922.590
High resolution limit [Å]2.4912.491
Rmeas0.168
Rpim0.056
Number of reflections339615374
<I/σ(I)>10.37
Completeness [%]99.7
Redundancy6.3
CC(1/2)0.9970.306
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.05 M potassium phosphate monobasic and 15% (w/v) PEG 8K

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PDB entries from 2024-05-15

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