7PF7
Apo structure of SynFtn variant D65A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-12-04 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9795 |
Spacegroup name | F 4 3 2 |
Unit cell lengths | 177.140, 177.140, 177.140 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.639 - 1.700 |
R-factor | 0.1829 |
Rwork | 0.182 |
R-free | 0.20800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | pdbid 5OUW |
RMSD bond length | 0.005 |
RMSD bond angle | 0.712 |
Data reduction software | DIALS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 53.330 | 53.330 | 1.730 |
High resolution limit [Å] | 1.690 | 7.560 | 1.690 |
Rmerge | 0.070 | 0.022 | 4.264 |
Rmeas | 0.071 | 0.023 | 4.292 |
Rpim | 0.008 | 0.003 | 0.491 |
Total number of observations | 2119682 | 24247 | 146252 |
Number of reflections | 27095 | 388 | 1939 |
<I/σ(I)> | 42.4 | 167.6 | 1.5 |
Completeness [%] | 100.0 | 98.7 | 100 |
Redundancy | 78.2 | 62.5 | 75.4 |
CC(1/2) | 1.000 | 1.000 | 0.779 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 289 | 2M NaCl |