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7P9N

Crystal structure of CD73 in complex with AMP in the open form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyPIXEL
Collection date2016-06-23
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.91841
Spacegroup nameP 21 21 2
Unit cell lengths67.345, 131.346, 66.253
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.270 - 1.550
R-factor0.1533
Rwork0.152
R-free0.17720
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)4h2g
RMSD bond length0.015
RMSD bond angle2.041
Data reduction softwareXDS
Data scaling softwareAimless (0.7.4)
Phasing softwareREFMAC
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]47.27047.2301.580
High resolution limit [Å]1.5508.5101.550
Rmerge0.1030.0480.422
Rmeas0.1130.0530.487
Rpim0.0440.0220.235
Total number of observations33119598
Number of reflections789066022429
<I/σ(I)>11.526.12.6
Completeness [%]92.698.458.5
Redundancy6.25.54
CC(1/2)0.9970.9970.822
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.8292.157 mg/mL protein concentration, 100 mM Tris pH 7.8, 10 % PEG6000, equal amounts of protein and reservoir. Following crystal formation (1-2 days), the crystals were transferred to soaking solution containing reservoir solution and 100 mM AMP. Crystals were then transferred to cryo solution containing an additional 20 % glycerol, soaked for ~2-5 min, and flash frozen in liquid nitrogen.

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