7P8J
Receptor-binding domain (RBD) of the spike protein of the bat coronavirus RaTG13 virus in complex with the extracellular domain of human angiotensin-converting enzyme 2 (ACE2) - Crystal form 2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-13 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 89.900, 107.717, 251.754 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.516 - 6.585 |
R-factor | 0.3195 |
Rwork | 0.318 |
R-free | 0.34500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6vw1 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 66.420 | 7.260 |
High resolution limit [Å] | 6.500 | 6.500 |
Rmerge | 0.459 | 2.905 |
Number of reflections | 5280 | 1424 |
<I/σ(I)> | 2.8 | 0.4 |
Completeness [%] | 99.7 | 99.2 |
Redundancy | 8.5 | 8.9 |
CC(1/2) | 0.979 | 0.531 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.9 | 293 | 0.2-0.25 M sodium thiocyanate, 18-23% PEG 3350, pH 6.9 |