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7P87

Crystal structure of YTHDC1 with compound YLI_DC1_001

Replaces:  6YM7
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyPIXEL
Collection date2020-01-30
DetectorDECTRIS PILATUS 2M-F
Wavelength(s)1
Spacegroup nameP 1 21 1
Unit cell lengths39.780, 103.780, 42.180
Unit cell angles90.00, 105.56, 90.00
Refinement procedure
Resolution40.640 - 1.300
R-factor0.1824
Rwork0.181
R-free0.20630
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4r3h
RMSD bond length0.006
RMSD bond angle0.854
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.6401.380
High resolution limit [Å]1.3001.300
Number of reflections7814712188
<I/σ(I)>17.04
Completeness [%]96.9
Redundancy4.6
CC(1/2)1.0000.697
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29525% PEG 3350, 0.2M Ammonium Sulphate, 0.1M Bis-Tris pH 6.5

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