7P84
Crystal structure of L147A/I351A variant of S-adenosylmethionine synthetase from Methanocaldococcus jannaschii in complex with ONB-SAM (2-nitro benzyme S-adenosyl-methionine)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-03 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.9184 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 76.104, 76.104, 280.674 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.040 - 2.054 |
R-factor | 0.1785 |
Rwork | 0.178 |
R-free | 0.22160 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7p82 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.775 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.040 | 2.180 |
High resolution limit [Å] | 2.050 | 2.050 |
Rmeas | 0.155 | 0.968 |
Number of reflections | 112614 | 17696 |
<I/σ(I)> | 8.1 | 1.58 |
Completeness [%] | 99.3 | |
Redundancy | 5.59 | |
CC(1/2) | 0.996 | 0.919 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 293.15 | 0.1 M sodium acetate pH 4.6, 40% (v/v) PEG200 |