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7P2X

E.coli GyrB24 with inhibitor KOB20 (EBL2583)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2019-06-23
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9795
Spacegroup nameC 1 2 1
Unit cell lengths76.170, 49.770, 53.040
Unit cell angles90.00, 102.11, 90.00
Refinement procedure
Resolution51.860 - 1.600
R-factor0.1447
Rwork0.142
R-free0.19880
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1kzn
RMSD bond length0.009
RMSD bond angle1.448
Data reduction softwareXDS
Data scaling softwareAimless (0.7.4)
Phasing softwareREFMAC
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]51.86051.8601.630
High resolution limit [Å]1.6008.6201.600
Rmerge0.0620.0301.215
Rmeas0.0670.0331.321
Rpim0.0250.0130.512
Total number of observations17588910708518
Number of reflections256981781302
<I/σ(I)>13.557.31.3
Completeness [%]99.896.999.1
Redundancy6.866.5
CC(1/2)0.9990.9990.684
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29341.7% w/v PEG4000,80 mM MgCl2,100 mM Tris pH8,1 mM KOB20,4.6% DMSO

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PDB entries from 2024-07-10

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