7OXL
Crystal structure of human Spermine Oxidase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-11-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.000010 |
Spacegroup name | P 3 2 1 |
Unit cell lengths | 190.919, 190.919, 43.574 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 165.340 - 2.400 |
R-factor | 0.1864 |
Rwork | 0.185 |
R-free | 0.21410 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | None |
RMSD bond length | 0.004 |
RMSD bond angle | 1.358 |
Data reduction software | autoPROC |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 165.340 | 2.436 |
High resolution limit [Å] | 2.395 | 2.395 |
Rmerge | 0.167 | 0.018 |
Number of reflections | 28433 | 27492 |
<I/σ(I)> | 9 | 1.4 |
Completeness [%] | 79.1 | 16.4 |
Redundancy | 11.8 | 10.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 293 | 29.9999 %v/v MPD, 0.05 M MES |