7OTB
Ruthenium polypridyl complex bound to a unimolecular chair-form G-quadruplex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-05-17 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.5604, 1.7712 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 29.680, 29.680, 113.980 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 21.290 - 1.600 |
R-factor | 0.1663 |
Rwork | 0.165 |
R-free | 0.18100 |
Structure solution method | SAD |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | SHELXDE |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 21.290 | 1.657 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.101 | 0.573 |
Rmeas | 0.104 | 0.599 |
Rpim | 0.026 | 0.171 |
Number of reflections | 140815 | 797 |
<I/σ(I)> | 14.35 | 2.39 |
Completeness [%] | 99.7 | 98.15 |
Redundancy | 17 | 11.8 |
CC(1/2) | 0.999 | 0.932 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | Annealing: 200 uM L-[Ru(phen)2(Aqphen)]2+, 200 uM GGGTTAGGGTTAGGGTTTGGG, and 10 mM KCl. Crystallisation: 100 uM L-[Ru(phen)2(Aqphen)]2+, 100 uM GGGTTAGGGTTAGGGTTTGGG, 5 mM KCl, 40 mM NaCl, 20 mM Na Cacodylate pH 7.0, 20% v/v MPD, 6 mM spermine hydrochloride, and 10 mM BaCl2. |