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7OTB

Ruthenium polypridyl complex bound to a unimolecular chair-form G-quadruplex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2021-05-17
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.5604, 1.7712
Spacegroup nameP 32 2 1
Unit cell lengths29.680, 29.680, 113.980
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution21.290 - 1.600
R-factor0.1663
Rwork0.165
R-free0.18100
Structure solution methodSAD
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwareSHELXDE
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]21.2901.657
High resolution limit [Å]1.6001.600
Rmerge0.1010.573
Rmeas0.1040.599
Rpim0.0260.171
Number of reflections140815797
<I/σ(I)>14.352.39
Completeness [%]99.798.15
Redundancy1711.8
CC(1/2)0.9990.932
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7277Annealing: 200 uM L-[Ru(phen)2(Aqphen)]2+, 200 uM GGGTTAGGGTTAGGGTTTGGG, and 10 mM KCl. Crystallisation: 100 uM L-[Ru(phen)2(Aqphen)]2+, 100 uM GGGTTAGGGTTAGGGTTTGGG, 5 mM KCl, 40 mM NaCl, 20 mM Na Cacodylate pH 7.0, 20% v/v MPD, 6 mM spermine hydrochloride, and 10 mM BaCl2.

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PDB entries from 2024-05-08

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