7OSV
DeNovoTIM6-SB, a de novo designed TIM barrel with a salt-bridge cluster (crystal form 1)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-16 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 29.370, 65.630, 44.610 |
Unit cell angles | 90.00, 95.74, 90.00 |
Refinement procedure
Resolution | 32.810 - 1.660 |
R-factor | 0.2102 |
Rwork | 0.209 |
R-free | 0.23730 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5bvl |
RMSD bond length | 0.006 |
RMSD bond angle | 0.592 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 32.810 | 1.720 |
High resolution limit [Å] | 1.660 | 1.660 |
Rmerge | 0.139 | 1.770 |
Rmeas | 0.150 | 2.990 |
Rpim | 0.057 | 1.114 |
Number of reflections | 19751 | 1947 |
<I/σ(I)> | 7.77 | 0.96 |
Completeness [%] | 98.9 | 97.45 |
Redundancy | 6.9 | 7 |
CC(1/2) | 0.997 | 0.339 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 293.15 | 0.2 M Ammonium sulfate, 0.2 M sodium acetate pH 4.6, 28% PEG 4000 |