7OQF
Human OMPD-domain of UMPS in complex with OMP at 1.05 Angstrom resolution, 5 minutes soaking
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-07-08 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 70.097, 61.970, 70.090 |
Unit cell angles | 90.00, 113.00, 90.00 |
Refinement procedure
Resolution | 42.560 - 1.050 |
R-factor | 0.1381 |
Rwork | 0.137 |
R-free | 0.15310 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6zwy |
RMSD bond length | 0.007 |
RMSD bond angle | 1.485 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.560 | 42.560 | 1.080 |
High resolution limit [Å] | 1.050 | 4.690 | 1.050 |
Rmerge | 0.061 | 0.016 | 1.423 |
Rmeas | 0.072 | 0.019 | 1.736 |
Total number of observations | 871672 | ||
Number of reflections | 253685 | 2935 | 18068 |
<I/σ(I)> | 11.46 | 61.14 | 0.97 |
Completeness [%] | 98.3 | 97.3 | 94.8 |
Redundancy | 3.436 | 3.392 | 2.953 |
CC(1/2) | 0.999 | 0.999 | 0.378 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.8 | 293.15 | Ammonium sulfate, Tris/HCl, Glutathion, Glycerol |