7ONZ
Crystal structure of PBP3 from P. aeruginosa
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-09-10 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9999 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 151.492, 37.455, 82.752 |
Unit cell angles | 90.00, 112.57, 90.00 |
Refinement procedure
Resolution | 40.750 - 1.860 |
R-factor | 0.2115 |
Rwork | 0.209 |
R-free | 0.25850 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3oc2 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.601 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.19.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.751 | 2.091 |
High resolution limit [Å] | 1.858 | 1.858 |
Rmeas | 0.071 | 0.966 |
Number of reflections | 19031 | 952 |
<I/σ(I)> | 12.3 | 1.6 |
Completeness [%] | 74.8 | 3.6 |
Redundancy | 6.1 | 4.6 |
CC(1/2) | 0.998 | 0.772 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 9 mg/ml PBP3, 0.2 M potassium/sodium tartrate, 20% (w/v) PEG 3350, 10% DMSO |