7ON7
Crystal structure of the computationally designed SAKe6BE-L2 protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-07-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 79.960, 45.400, 81.620 |
Unit cell angles | 90.00, 114.72, 90.00 |
Refinement procedure
Resolution | 40.600 - 1.950 |
R-factor | 0.2341 |
Rwork | 0.232 |
R-free | 0.27890 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Designed model |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.19.2-4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.600 | 40.600 | 2.000 |
High resolution limit [Å] | 1.950 | 8.940 | 1.950 |
Rmerge | 0.135 | 0.069 | 0.675 |
Rmeas | 0.147 | 0.075 | 0.733 |
Rpim | 0.058 | 0.028 | 0.285 |
Total number of observations | 247539 | 2798 | 17550 |
Number of reflections | 38986 | 440 | 2716 |
<I/σ(I)> | 6.6 | 15.7 | 2.1 |
Completeness [%] | 99.4 | 98.6 | 98.3 |
Redundancy | 6.3 | 6.4 | 6.5 |
CC(1/2) | 0.993 | 0.998 | 0.943 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293.15 | 0.2 M Magnesium chloride, 0.1 M Tris, 30% (w/v) PEG 4000 |