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7OMO

Crystal structure of coelenteramine-bound Renilla reniformis luciferase RLuc8-D120A variant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyPIXEL
Collection date2018-08-27
DetectorDECTRIS PILATUS 2M-F
Wavelength(s)0.9990
Spacegroup nameP 1 21 1
Unit cell lengths49.315, 139.972, 50.623
Unit cell angles90.00, 112.56, 90.00
Refinement procedure
Resolution46.751 - 1.451
R-factor0.1641
Rwork0.163
R-free0.18120
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2SPJ
RMSD bond length0.005
RMSD bond angle0.786
Data reduction softwareXDS
Data scaling softwareAimless (0.6.2)
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2-4158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]46.75110.0001.480
High resolution limit [Å]1.4507.9501.450
Rmerge0.0460.0220.861
Rmeas0.0490.0240.932
Rpim0.0190.0110.353
Number of reflections1115217085415
<I/σ(I)>21.2
Completeness [%]99.999.899.2
Redundancy6.86.46.8
CC(1/2)1.0000.9990.807
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5293.15PEG3350, magnesium chloride, bis-tris

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