7OCT
NADPH bound to the dehydrogenase domain of the bifunctional mannitol-1-phosphate dehydrogenase/phosphatase MtlD-N374A from Acinetobacter baumannii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-31 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9786 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 99.304, 156.957, 220.028 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.430 - 2.850 |
R-factor | 0.2298 |
Rwork | 0.227 |
R-free | 0.27840 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7ocn |
RMSD bond length | 0.002 |
RMSD bond angle | 1.151 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | REFMAC (5.8.0258) |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.430 | 48.430 | 2.970 |
High resolution limit [Å] | 2.850 | 10.280 | 2.850 |
Rmerge | 0.172 | 0.043 | 1.652 |
Rmeas | 0.179 | 0.045 | 1.724 |
Rpim | 0.051 | 0.013 | 0.489 |
Total number of observations | 491072 | 10841 | 55103 |
Number of reflections | 40545 | 952 | 4524 |
<I/σ(I)> | 13.1 | 38.7 | 2 |
Completeness [%] | 100.0 | 99.2 | 100 |
Redundancy | 12.1 | 11.4 | 12.2 |
CC(1/2) | 0.998 | 0.999 | 0.833 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291 | 0.1M BIS-Tris propane pH6.5, 0.2M Na2SO4, 18% PEG3350, 0.02M MgCl2, 0.1M potassium acetate with microseeding |