7OAW
Crystal structure of the Chili RNA aptamer in complex with DMHBI+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-18 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.0332 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 59.071, 100.031, 113.865 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.440 - 2.950 |
R-factor | 0.221 |
Rwork | 0.218 |
R-free | 0.26470 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7oa3 |
RMSD bond length | 0.001 |
RMSD bond angle | 0.487 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.480 | 3.060 |
High resolution limit [Å] | 2.890 | 2.890 |
Rmerge | 0.195 | |
Number of reflections | 15716 | 2474 |
<I/σ(I)> | 8.2 | 0.4 |
Completeness [%] | 99.7 | |
Redundancy | 13 | |
CC(1/2) | 0.317 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | PEG 400, MES, Spermine tetrahydrochloride |