7O9T
Crystal structure of Human Menin in apo form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-11-30 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0332 |
Spacegroup name | P 43 2 2 |
Unit cell lengths | 107.323, 107.323, 106.729 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.996 - 2.159 |
R-factor | 0.2093 |
Rwork | 0.207 |
R-free | 0.25170 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ddc |
RMSD bond length | 0.007 |
RMSD bond angle | 0.828 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.236 |
High resolution limit [Å] | 2.159 | 2.159 |
Rmerge | 0.478 | |
Rmeas | 0.499 | |
Rpim | 0.142 | |
Number of reflections | 34097 | 3342 |
<I/σ(I)> | 18.09 | 4.27 |
Completeness [%] | 99.9 | 99.73 |
Redundancy | 11.7 | 12 |
CC(1/2) | 0.998 | 0.949 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 12% PEG 3350 14% Glycerol |