Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7O4O

Structure of Staphylococcus aureus m1A22-tRNA methyltransferase in complex with S-adenosylhomocysteine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]90
Detector technologyPIXEL
Collection date2017-09-24
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.9795
Spacegroup nameP 21 21 21
Unit cell lengths59.750, 61.440, 63.190
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.370 - 1.520
R-factor0.1724
Rwork0.169
R-free0.23170
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)D_1292115104
RMSD bond length0.011
RMSD bond angle1.704
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]19.4001.570
High resolution limit [Å]1.5201.520
Rmerge0.0340.480
Number of reflections362253577
<I/σ(I)>15.61.54
Completeness [%]99.3
Redundancy22
CC(1/2)0.9900.390
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.1 M ammonium acetate, 0.1 M Bis-Tris pH 5.5, 17% PEG 10,000

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon