7O1E
Crystal structure of PCNA from Chaetomium thermophilum
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-10-23 |
Detector | RIGAKU SATURN 944+ |
Wavelength(s) | 1.54178 |
Spacegroup name | H 3 |
Unit cell lengths | 86.270, 86.270, 90.842 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 30.280 - 2.340 |
R-factor | 0.2161 |
Rwork | 0.213 |
R-free | 0.27980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5tup |
RMSD bond length | 0.006 |
RMSD bond angle | 1.444 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.7.4) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.280 | 30.280 | 2.420 |
High resolution limit [Å] | 2.340 | 9.050 | 2.340 |
Rmerge | 0.097 | 0.049 | 0.547 |
Rmeas | 0.108 | 0.055 | 0.637 |
Rpim | 0.046 | 0.023 | 0.320 |
Total number of observations | 54849 | 1002 | 3563 |
Number of reflections | 10552 | 182 | 951 |
<I/σ(I)> | 9.6 | 20.4 | 2 |
Completeness [%] | 98.9 | 97.6 | 90.7 |
Redundancy | 5.2 | 5.5 | 3.7 |
CC(1/2) | 0.997 | 0.998 | 0.786 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 293 | 0.1M PTCP pH 5.0, 25% PEG 1500 |