7O0O
Crystal structure of the B3 metallo-beta-lactamase L1 with hydrolysed ertapenem
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-07-15 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.96862 |
Spacegroup name | P 64 2 2 |
Unit cell lengths | 105.803, 105.803, 98.149 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 32.720 - 1.450 |
R-factor | 0.155 |
Rwork | 0.154 |
R-free | 0.16920 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5evd |
Data reduction software | DIALS |
Data scaling software | DIALS |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.570 | 1.470 |
High resolution limit [Å] | 1.450 | 1.450 |
Rpim | 0.024 | 0.540 |
Number of reflections | 57760 | 2805 |
<I/σ(I)> | 18.2 | 1.4 |
Completeness [%] | 100.0 | 98.6 |
Redundancy | 36.7 | 30.3 |
CC(1/2) | 0.999 | 0.804 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 100 mM Hepes pH 7.75, 2.0 M ammonium sulphate, 1.5% PEG400. 1 ul protein (15 mg/ml) mixed with 1 ul reservoir. |