Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7NZ8

Crystal structure of mouse ADAT2/ADAT3 tRNA deamination complex 2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyPIXEL
Collection date2020-05-05
DetectorDECTRIS PILATUS 2M-F
Wavelength(s)1.00001
Spacegroup nameP 2 21 21
Unit cell lengths52.291, 106.832, 130.580
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.440 - 2.120
R-factor0.203
Rwork0.201
R-free0.23340
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3dh1
RMSD bond length0.008
RMSD bond angle0.880
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHENIX
Refinement softwarePHENIX (1.19rc4_4035)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.250
High resolution limit [Å]2.1202.120
Rmerge0.1802.420
Number of reflections422566653
<I/σ(I)>11.571.05
Completeness [%]99.8
Redundancy13.3
CC(1/2)0.9980.522
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29320% (W/V) PEG3350, 0.1 M Bis-Tris Propane pH 7.5, 0.2M KSCN

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon