7NXH
Structure of SARS-CoV2 NSP5 (3C-like proteinase) determined in-house
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SEALED TUBE |
Source details | BRUKER IMUS MICROFOCUS |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-01-25 |
Detector | Bruker PHOTON III |
Wavelength(s) | 1.5418 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 113.910, 53.430, 44.970 |
Unit cell angles | 90.00, 101.85, 90.00 |
Refinement procedure
Resolution | 23.300 - 2.100 |
R-factor | 0.219 |
Rwork | 0.216 |
R-free | 0.26800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7k3t |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.180 | 2.230 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.170 | 0.990 |
Number of reflections | 29702 | 1989 |
<I/σ(I)> | 8.48 | |
Completeness [%] | 95.4 | 80.2 |
Redundancy | 5.9 | |
CC(1/2) | 0.990 | 0.820 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 0.2 M ammonium phosphate, 20% PEG 3350, 1.5 mM zinc chloride |