7NR6
Structure of NUDT15 in complex with NSC56456
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-08-15 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9184 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 46.843, 49.032, 135.380 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 67.690 - 1.800 |
R-factor | 0.1882 |
Rwork | 0.187 |
R-free | 0.20590 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5bon |
RMSD bond length | 0.006 |
RMSD bond angle | 0.822 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 67.690 | 1.840 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.079 | 0.919 |
Rmeas | 0.086 | 0.993 |
Rpim | 0.033 | 0.371 |
Number of reflections | 29634 | 1714 |
<I/σ(I)> | 12.7 | |
Completeness [%] | 99.7 | |
Redundancy | 6.7 | |
CC(1/2) | 0.998 | 0.757 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 0.1 M Tris pH 8.5, 0.2M sodium acetate, 30% PEG 4000 |