7NQF
Prim-Pol Domain of CRISPR-associated Prim-Pol (CAPP) from Marinitoga sp. 1137 with dsDNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-09-17 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9159 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 77.041, 160.362, 39.800 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 69.440 - 2.020 |
R-factor | 0.2144 |
Rwork | 0.212 |
R-free | 0.25930 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7nqd |
RMSD bond length | 0.008 |
RMSD bond angle | 0.942 |
Data reduction software | DIALS |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 80.180 | 2.060 |
High resolution limit [Å] | 2.020 | 2.020 |
Rmerge | 0.159 | 1.986 |
Rmeas | 0.182 | 2.257 |
Rpim | 0.086 | 1.059 |
Number of reflections | 33089 | 1622 |
<I/σ(I)> | 5.6 | 0.7 |
Completeness [%] | 99.8 | 99.9 |
Redundancy | 4.3 | 4.4 |
CC(1/2) | 0.995 | 0.321 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 287 | Sodium cacodylate PEG 4000 Sodium Chloride Spermine Cobalt chloride Guanosine triphosphate |