7NLH
S. cerevisiae Ty1 p22 restriction factor, Gag CA-CTD, AUG1 variant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-09-25 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.97954 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 282.124, 282.124, 39.967 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 141.460 - 2.800 |
R-factor | 0.2568 |
Rwork | 0.256 |
R-free | 0.26390 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Ty1 p22 Aug2 variant partial model |
RMSD bond length | 0.004 |
RMSD bond angle | 1.287 |
Data reduction software | DIALS (1.14.5) |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 244.400 | 2.950 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmeas | 0.101 | 3.912 |
Rpim | 0.016 | 0.627 |
Number of reflections | 23876 | 3390 |
<I/σ(I)> | 21.6 | 1.2 |
Completeness [%] | 100.0 | 100 |
Redundancy | 38.7 | 38.6 |
CC(1/2) | 1.000 | 0.491 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 300 nl protein (6.25 mg mL-1, in 20 mM Tris-HCl pH 8.5, 150 mM NaCl, 1 mM TCEP) 100 nl Mother Liquor (1.16 M Li2SO4, 0.1 M Tris-HCl pH 9.0) pH screened 7.5-9.0, Li2SO4 screened 1.125M-1.25M. |