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7NLH

S. cerevisiae Ty1 p22 restriction factor, Gag CA-CTD, AUG1 variant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2019-09-25
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.97954
Spacegroup nameP 65 2 2
Unit cell lengths282.124, 282.124, 39.967
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution141.460 - 2.800
R-factor0.2568
Rwork0.256
R-free0.26390
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Ty1 p22 Aug2 variant partial model
RMSD bond length0.004
RMSD bond angle1.287
Data reduction softwareDIALS (1.14.5)
Data scaling softwareAimless (0.7.4)
Phasing softwarePHASER (2.8.3)
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]244.4002.950
High resolution limit [Å]2.8002.800
Rmeas0.1013.912
Rpim0.0160.627
Number of reflections238763390
<I/σ(I)>21.61.2
Completeness [%]100.0100
Redundancy38.738.6
CC(1/2)1.0000.491
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP291300 nl protein (6.25 mg mL-1, in 20 mM Tris-HCl pH 8.5, 150 mM NaCl, 1 mM TCEP) 100 nl Mother Liquor (1.16 M Li2SO4, 0.1 M Tris-HCl pH 9.0) pH screened 7.5-9.0, Li2SO4 screened 1.125M-1.25M.

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PDB entries from 2025-06-18

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