7NEB
Crystal structure of branched-chain amino acid aminotransferase from Thermobaculum terrenum (M4 mutant)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-10-11 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.00 |
Spacegroup name | H 3 2 |
Unit cell lengths | 146.020, 146.020, 142.115 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 94.470 - 2.200 |
R-factor | 0.2083 |
Rwork | 0.206 |
R-free | 0.25500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6q8e |
RMSD bond length | 0.018 |
RMSD bond angle | 2.216 |
Data reduction software | HKL-2000 |
Data scaling software | Aimless (0.7.4) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 94.470 | 94.470 | 1.940 |
High resolution limit [Å] | 1.900 | 9.110 | 1.900 |
Rmerge | 0.071 | 0.014 | 3.805 |
Rmeas | 0.083 | 0.017 | 4.406 |
Rpim | 0.041 | 0.008 | 2.189 |
Total number of observations | 178796 | 1654 | 11582 |
Number of reflections | 45188 | 435 | 2910 |
<I/σ(I)> | 10 | 81.6 | 0.3 |
Completeness [%] | 98.8 | 96 | 99.4 |
Redundancy | 4 | 3.8 | 4 |
CC(1/2) | 0.999 | 1.000 | 0.121 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIQUID DIFFUSION | 293 | HEPES 0.1M pH 7.5; Sodium chloride 3.4M |