7N6D
HLA peptide complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-10-09 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.953731 |
Spacegroup name | P 31 1 2 |
Unit cell lengths | 85.197, 85.197, 442.850 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.280 - 2.300 |
R-factor | 0.2144 |
Rwork | 0.213 |
R-free | 0.24700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3gso |
RMSD bond length | 0.003 |
RMSD bond angle | 0.654 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.210 | 2.340 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.165 | 1.782 |
Rmeas | 0.160 | |
Rpim | 0.060 | 0.482 |
Number of reflections | 82685 | 4473 |
<I/σ(I)> | 10.3 | 1.5 |
Completeness [%] | 99.9 | 99.95 |
Redundancy | 14 | 14.4 |
CC(1/2) | 0.997 | 0.997 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293.15 | 20% PEG3350, 0.2 M sodium thiocyanate |