7N5Z
SARS-CoV-2 Main protease C145S mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS SIRUS BEAMLINE MANACA |
Synchrotron site | LNLS SIRUS |
Beamline | MANACA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-02 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.977180 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 114.861, 53.403, 44.779 |
Unit cell angles | 90.00, 101.86, 90.00 |
Refinement procedure
Resolution | 48.240 - 1.760 |
R-factor | 0.1588 |
Rwork | 0.155 |
R-free | 0.19690 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5r8t |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.240 | 48.240 | 1.850 |
High resolution limit [Å] | 1.760 | 5.560 | 1.760 |
Rmerge | 0.053 | 0.028 | 0.502 |
Rmeas | 0.063 | 0.034 | 0.596 |
Rpim | 0.034 | 0.018 | 0.318 |
Total number of observations | 83163 | 2984 | 13047 |
Number of reflections | 25356 | 874 | 3819 |
<I/σ(I)> | 12.8 | 31.6 | 2.7 |
Completeness [%] | 95.9 | 98.9 | 99.7 |
Redundancy | 3.3 | 3.4 | 3.4 |
CC(1/2) | 0.999 | 0.999 | 0.844 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 0.1 M Bis-Tris, pH 6.5, 25% w/v PEG3350 |