7N07
Crystal structure of the apo 3D6 antibody fragment
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | CLSI BEAMLINE 08ID-1 |
| Synchrotron site | CLSI |
| Beamline | 08ID-1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2016-09-27 |
| Detector | RAYONIX MX-300 |
| Wavelength(s) | 0.9801 |
| Spacegroup name | P 43 21 2 |
| Unit cell lengths | 84.429, 84.429, 161.022 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 48.000 - 2.400 |
| R-factor | 0.1986 |
| Rwork | 0.195 |
| R-free | 0.23910 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1dfb |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.342 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.28) |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 48.000 | 47.950 | 2.490 |
| High resolution limit [Å] | 2.400 | 8.980 | 2.400 |
| Rmerge | 0.128 | 0.039 | 1.570 |
| Rmeas | 0.132 | 0.040 | 1.608 |
| Rpim | 0.029 | 0.009 | 0.341 |
| Number of reflections | 23589 | 548 | 2430 |
| <I/σ(I)> | 20.4 | ||
| Completeness [%] | 100.0 | 99.5 | 100 |
| Redundancy | 10.9 | ||
| CC(1/2) | 0.999 | 0.999 | 0.877 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.17 M ammonium sulfate, 25.5% (w/v) PEG 4000, and 15% (v/v) glycerol |






