7MZH
SARS-CoV-2 receptor binding domain bound to Fab WCSL 119
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-01-05 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.95373 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 93.704, 72.833, 103.988 |
Unit cell angles | 90.00, 90.71, 90.00 |
Refinement procedure
Resolution | 45.701 - 2.100 |
R-factor | 0.2221 |
Rwork | 0.220 |
R-free | 0.26530 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6w41 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.15_3459) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.850 | 46.850 | 2.140 |
High resolution limit [Å] | 2.100 | 10.910 | 2.100 |
Rmerge | 0.073 | 0.025 | 0.820 |
Rmeas | 0.081 | 0.029 | 0.920 |
Rpim | 0.035 | 0.013 | 0.411 |
Total number of observations | 416245 | 2983 | 22048 |
Number of reflections | 81929 | 631 | 4526 |
<I/σ(I)> | 11.8 | 39.9 | 1.8 |
Completeness [%] | 99.9 | 98.6 | 99.9 |
Redundancy | 5.1 | 4.7 | 4.9 |
CC(1/2) | 0.999 | 0.999 | 0.805 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 14% PEG3350, 0.2 M potassium thiocyanate |