7MWA
Crystal structure of 2-octaprenyl-6-methoxyphenol hydroxylase UbiH from Acinetobacter baumannii, apoenzyme
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2019-07-24 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.548 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 199.378, 71.680, 111.261 |
Unit cell angles | 90.00, 118.94, 90.00 |
Refinement procedure
Resolution | 30.000 - 2.600 |
R-factor | 0.2021 |
Rwork | 0.200 |
R-free | 0.24600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4k22 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.492 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | MrBUMP |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.640 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.086 | 0.506 |
Rpim | 0.047 | 0.318 |
Number of reflections | 42324 | 1940 |
<I/σ(I)> | 12.33 | 1.12 |
Completeness [%] | 99.0 | 89.8 |
Redundancy | 4.1 | 3 |
CC(1/2) | 0.838 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 298 | 0.2 M magnesium chloride, 0.1 M sodium citrate pH 5, 10% (w/v) PEG 20K. Cryoprotectant 25% (w/v) ethylene glycol |