7MRG
Crystal structure of the first bromodomain (BD1) of human BRDT bound to NC-II-153
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-04-10 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 29.870, 66.620, 142.720 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.700 - 1.990 |
R-factor | 0.2263 |
Rwork | 0.224 |
R-free | 0.26950 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4kcx |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.19_4092) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.700 | 48.700 | 2.040 |
High resolution limit [Å] | 1.990 | 8.900 | 1.990 |
Rmerge | 0.128 | 0.080 | 0.692 |
Rmeas | 0.139 | 0.087 | 0.749 |
Total number of observations | 128444 | ||
Number of reflections | 19986 | 273 | 1434 |
<I/σ(I)> | 8.67 | 14.15 | 3.08 |
Completeness [%] | 98.1 | 96.1 | 98.6 |
Redundancy | 6.427 | 5.231 | 6.794 |
CC(1/2) | 0.994 | 0.994 | 0.862 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.2 M Ammonium sulfate, 0.1 M Sodium cacodylate trihydrate pH 6.5, 30% w/v Polyethylene glycol 8,000 |