7MRB
Crystal structure of the first bromodomain (BD1) of human BRD4 bound to NC-III-53
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-27 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 38.190, 43.370, 78.810 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.160 - 1.200 |
R-factor | 0.1723 |
Rwork | 0.172 |
R-free | 0.18960 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3mxf |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.19_4092) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.160 | 29.160 | 1.230 |
High resolution limit [Å] | 1.200 | 5.370 | 1.200 |
Rmerge | 0.075 | 0.073 | 0.137 |
Rmeas | 0.079 | 0.078 | 0.146 |
Total number of observations | 522943 | ||
Number of reflections | 41371 | 508 | 2926 |
<I/σ(I)> | 24.58 | 28.43 | 12.38 |
Completeness [%] | 99.2 | 93.4 | 96 |
Redundancy | 12.64 | 9.614 | 9.102 |
CC(1/2) | 0.996 | 0.989 | 0.989 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.2 M Ammonium sulfate, 0.1 M Tris pH 8.5, 25% w/v Polyethylene glycol 3,350 |