7MO4
Crystal Structure of the ZnF3 of Nucleoporin NUP153 in complex with Ran-GDP, resolution 2.4 Angstrom
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-11 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97946 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 67.660, 61.240, 69.750 |
Unit cell angles | 90.00, 104.04, 90.00 |
Refinement procedure
Resolution | 29.440 - 2.400 |
R-factor | 0.2154 |
Rwork | 0.214 |
R-free | 0.23680 |
Structure solution method | SAD |
Data reduction software | XDS |
Data scaling software | xia2 |
Phasing software | AutoSol |
Refinement software | PHENIX (1.18.2) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.440 | 29.440 | 2.490 |
High resolution limit [Å] | 2.400 | 5.160 | 2.400 |
Rmeas | 0.086 | 0.059 | 1.463 |
Rpim | 0.033 | 0.023 | 0.552 |
Total number of observations | 14032 | 14427 | |
Number of reflections | 41648 | 2201 | 2104 |
<I/σ(I)> | 11.3 | 26.5 | 1.3 |
Completeness [%] | 98.6 | 97.9 | 98.5 |
Redundancy | 6.7 | 6.4 | 6.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.9 | 294 | 20% w/v PEG3350, 0.1 M Bis-Tris |