7MNT
Crystal Structure of the ZnF5 or ZnF6 of Nucleoporin NUP358/RanBP2 in complex with Ran-GDP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-11-15 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.2828 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 53.020, 94.270, 108.160 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.520 - 2.450 |
R-factor | 0.2145 |
Rwork | 0.212 |
R-free | 0.25660 |
Structure solution method | SAD |
Data reduction software | XDS |
Data scaling software | xia2 |
Phasing software | AutoSol |
Refinement software | PHENIX (1.18.2) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.520 | 29.520 | 2.540 |
High resolution limit [Å] | 2.450 | 5.270 | 2.450 |
Rmeas | 0.119 | 0.057 | 3.284 |
Rpim | 0.023 | 0.012 | 0.637 |
Total number of observations | 524547 | 49374 | 52237 |
Number of reflections | 20617 | 2211 | 2020 |
<I/σ(I)> | 21.8 | 54.5 | 1.6 |
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 25.4 | 22.3 | 25.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 294 | 19 % (w/v) PEG 3,350; 0.1M Bis-Tris |