7MNS
Crystal Structure of the ZnF4 of Nucleoporin NUP358/RanBP2 in complex with Ran-GDP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-04-13 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.28210 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 92.480, 92.480, 194.780 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.910 - 2.100 |
R-factor | 0.1761 |
Rwork | 0.175 |
R-free | 0.20250 |
Structure solution method | SAD |
Data reduction software | XDS |
Data scaling software | xia2 |
Phasing software | AutoSol |
Refinement software | PHENIX (1.18.2) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.910 | 29.920 | 2.180 |
High resolution limit [Å] | 2.100 | 4.520 | 2.100 |
Rmeas | 0.181 | 0.052 | 2.315 |
Rpim | 0.035 | 0.010 | 0.448 |
Total number of observations | 754508 | 75845 | 73905 |
Number of reflections | 29596 | 3246 | 2860 |
<I/σ(I)> | 21.2 | 64.4 | 1.8 |
Completeness [%] | 100.0 | 100 | 99.9 |
Redundancy | 25.5 | 23.4 | 25.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 294 | 18 % (w/v) PEG 3,350; 0.1M Bis-Tris |