7MJ7
HLA-A*02:01 bound to Neuroblastoma Derived IGFBPL1 peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-04-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.11583 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 50.929, 79.150, 54.650 |
Unit cell angles | 90.00, 111.33, 90.00 |
Refinement procedure
Resolution | 50.906 - 1.600 |
R-factor | 0.1633 |
Rwork | 0.162 |
R-free | 0.19230 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5c07 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.045 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.910 | 1.630 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.106 | 0.904 |
Number of reflections | 52628 | 2609 |
<I/σ(I)> | 9.1 | 1.9 |
Completeness [%] | 98.8 | |
Redundancy | 6 | |
CC(1/2) | 0.990 | 0.670 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 1M Sodium Citrate Dibasic, 0.1M Sodium Cacodylate pH 6.5 |