7MFR
Crystal Structure of a Fab fragment bound to peptide GGM
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-11-08 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9876 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 163.797, 163.797, 127.471 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.083 - 2.848 |
R-factor | 0.2133 |
Rwork | 0.211 |
R-free | 0.26030 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ma3 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.114 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | PHENIX (1.12-2829_final) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.950 |
High resolution limit [Å] | 2.848 | 6.140 | 2.850 |
Rmerge | 0.128 | 0.059 | |
Rmeas | 0.133 | 0.062 | |
Rpim | 0.039 | 0.018 | 0.344 |
Number of reflections | 40950 | 4373 | 4019 |
<I/σ(I)> | 6.1 | ||
Completeness [%] | 99.9 | 100 | 99.2 |
Redundancy | 12.5 | 12.1 | 11.9 |
CC(1/2) | 0.999 | 0.806 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 2 M Ammonium Sulfate, 0.1M MES pH 6.5 |