7MAZ
SARS-CoV-2 Main Protease (Mpro) in Complex with Covalent Inhibitor SM139
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-2 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-03-02 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.979356 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 47.823, 105.273, 52.894 |
Unit cell angles | 90.00, 104.05, 90.00 |
Refinement procedure
Resolution | 29.630 - 1.700 |
R-factor | 0.1656 |
Rwork | 0.164 |
R-free | 0.20750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7l0d |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.630 | 1.760 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.044 | 0.344 |
Number of reflections | 53454 | 4337 |
<I/σ(I)> | 10.2 | 1.8 |
Completeness [%] | 95.9 | 77.8 |
Redundancy | 2 | 1.8 |
CC(1/2) | 0.997 | 0.730 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 19% PEG 3350 + 0.1M Bis-Tris-Methane:HCl pH 5.5 + 0.2M NaCl |