7M7V
Crystal Structure of Mtb Pks13 Thioesterase domain in complex with Compound 6
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-07-21 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 89.970, 110.280, 57.630 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.530 - 2.290 |
R-factor | 0.2249 |
Rwork | 0.223 |
R-free | 0.26890 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5v3w |
RMSD bond length | 0.009 |
RMSD bond angle | 0.942 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.530 | 2.372 |
High resolution limit [Å] | 2.290 | 2.290 |
Rmerge | 0.151 | 1.738 |
Rpim | 0.067 | |
Number of reflections | 26061 | 2545 |
<I/σ(I)> | 9.6 | 1.1 |
Completeness [%] | 97.7 | 98.15 |
Redundancy | 6.2 | 6.4 |
CC(1/2) | 0.994 | 0.443 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 290 | 0.1 M Tris-HCl, 2.0-1.8 M ammonium sulfate, 2%-5% v/v PPG P400 |