7M03
Structure of SARS-CoV-2 3CL protease in complex with inhibitor 18c
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-10-17 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 55.022, 98.612, 58.339 |
Unit cell angles | 90.00, 107.40, 90.00 |
Refinement procedure
Resolution | 36.910 - 2.000 |
R-factor | 0.1861 |
Rwork | 0.183 |
R-free | 0.24880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6xmk |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.310 | 49.310 | 2.050 |
High resolution limit [Å] | 2.000 | 8.940 | 2.000 |
Rmerge | 0.064 | 0.034 | 0.723 |
Total number of observations | 136296 | 1645 | 10474 |
Number of reflections | 39124 | 473 | 2964 |
<I/σ(I)> | 10.3 | 31.2 | 1.8 |
Completeness [%] | 97.4 | 99.2 | 99.9 |
Redundancy | 3.5 | 3.5 | 3.5 |
CC(1/2) | 0.998 | 0.998 | 0.731 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 30% w/v PEG2000 MME, 100 mM potassium thiocyanate |