7LP1
Structure of Nedd4L WW3 domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL7-1 |
Synchrotron site | SSRL |
Beamline | BL7-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-06-17 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.1 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 40.344, 40.344, 54.860 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.470 - 1.350 |
R-factor | 0.1868 |
Rwork | 0.184 |
R-free | 0.21350 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2mpt |
RMSD bond length | 0.010 |
RMSD bond angle | 1.116 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.398 |
High resolution limit [Å] | 1.000 | 1.350 |
Rmerge | 0.169 | |
Rmeas | 0.238 | |
Number of reflections | 11774 | 1140 |
<I/σ(I)> | 33.25 | 4.26 |
Completeness [%] | 99.8 | 98.16 |
Redundancy | 2 | 2 |
CC(1/2) | 1.000 | 0.958 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 293.15 | 3.6M ammonium nitrate, 5% glycerol, and 0.1M sodium acetate at pH 4.6 |